Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.32□□□□□ -0.12
Smc3Q9CW03 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc3Q9CW03 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.31□□□□□ -0.12
Smc3Q9CW03 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.31□□□□□ -0.12
Smc3Q9CW03 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc3Q9CW03 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm14999-201ENSMUST00000121039 624 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm24548-201ENSMUST00000158650 108 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm17150-201ENSMUST00000165577 381 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm27023-201ENSMUST00000182372 285 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm8602-201ENSMUST00000184045 607 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm6266-201ENSMUST00000203844 806 ntBASIC14.3□□□□□ -0.12
Smc3Q9CW03 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc3Q9CW03 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms