Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTRAFQ9CQE8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm14760-201ENSMUST00000121831 999 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm14822-201ENSMUST00000122247 291 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm27618-201ENSMUST00000183671 60 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm38223-201ENSMUST00000194484 695 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTRAFQ9CQE8 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Gm27741-201ENSMUST00000185060 237 ntBASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Gm16372-201ENSMUST00000073088 450 ntBASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms