Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Gtf2ird2Q99NI3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf2ird2Q99NI3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms