Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm22334-201ENSMUST00000158070 133 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm43184-201ENSMUST00000197247 542 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sf3b1Q99NB9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm14058-201ENSMUST00000116082 735 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm13035-201ENSMUST00000117496 342 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm15515-201ENSMUST00000117827 822 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm13611-201ENSMUST00000118269 318 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm12501-201ENSMUST00000119163 529 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm5369-201ENSMUST00000217499 588 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm21811-201ENSMUST00000096485 930 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms