Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac9Q99N13 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm12516-201ENSMUST00000120819 385 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm22138-201ENSMUST00000158748 128 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm23771-201ENSMUST00000178702 110 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Mir7076-201ENSMUST00000183519 74 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gm27910-201ENSMUST00000185004 107 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.33□□□□□ -0.12
Hdac9Q99N13 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac9Q99N13 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm15352-201ENSMUST00000118696 270 ntBASIC14.32□□□□□ -0.12
Hdac9Q99N13 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm23045-201ENSMUST00000175041 96 ntBASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm7593-201ENSMUST00000187246 644 ntBASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm34023-201ENSMUST00000195539 217 ntBASIC14.32□□□□□ -0.12
Hdac9Q99N13 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.32□□□□□ -0.12
Hdac9Q99N13 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.32□□□□□ -0.12
Hdac9Q99N13 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac9Q99N13 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm11451-201ENSMUST00000118946 630 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm5419-201ENSMUST00000119301 527 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm14247-201ENSMUST00000120950 237 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm25072-201ENSMUST00000175233 235 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm29499-201ENSMUST00000189151 486 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm28329-201ENSMUST00000191208 689 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm29171-201ENSMUST00000191397 486 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm44882-201ENSMUST00000205702 802 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.31□□□□□ -0.12
Hdac9Q99N13 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms