Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm27320-201ENSMUST00000184892 109 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm5950-201ENSMUST00000213337 772 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm14760-201ENSMUST00000121831 999 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm20482-202ENSMUST00000174729 825 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.88□□□□□ -0.51
Msh4Q99MT2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Msh4Q99MT2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm14726-201ENSMUST00000120623 896 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm26083-201ENSMUST00000157904 193 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm37201-201ENSMUST00000191845 523 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm31256-201ENSMUST00000194705 506 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms