Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm2517-201ENSMUST00000215651 348 ntBASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Snora73b-201ENSMUST00000083419 205 ntBASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd2Q99JR8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Gm8737-201ENSMUST00000122208 642 ntBASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd2Q99JR8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm13916-201ENSMUST00000117368 628 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm15207-201ENSMUST00000119259 442 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm9630-201ENSMUST00000178304 885 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm23771-201ENSMUST00000178702 110 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm4034-201ENSMUST00000187674 480 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm29499-201ENSMUST00000189151 486 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm28329-201ENSMUST00000191208 689 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm29171-201ENSMUST00000191397 486 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd2Q99JR8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms