Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx1Q91VR5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Map1b-203ENSMUST00000223725 2669 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm24934-201ENSMUST00000103764 111 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm14109-201ENSMUST00000118814 309 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm14832-201ENSMUST00000121289 322 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm9211-201ENSMUST00000182882 975 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm3096-201ENSMUST00000185770 364 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx1Q91VR5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm15131-201ENSMUST00000119124 595 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm8194-201ENSMUST00000159783 859 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Gm5051-201ENSMUST00000204085 485 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.6□□□□□ -0.39
Ddx1Q91VR5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx1Q91VR5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms