Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm11597-201ENSMUST00000121423 964 ntBASIC14.04□□□□□ -0.16
Ddx41Q91VN6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.04□□□□□ -0.16
Ddx41Q91VN6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gm10312-201ENSMUST00000078515 489 ntBASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx41Q91VN6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm4909-201ENSMUST00000118749 794 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm15703-201ENSMUST00000120250 880 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm44262-201ENSMUST00000204969 372 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx41Q91VN6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx41Q91VN6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms