Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
StrcQ8VIM6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm12036-201ENSMUST00000120008 530 ntBASIC14.11□□□□□ -0.15
StrcQ8VIM6 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm18010-201ENSMUST00000203553 202 ntBASIC14.11□□□□□ -0.15
StrcQ8VIM6 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.11□□□□□ -0.15
StrcQ8VIM6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
StrcQ8VIM6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Gm3828-201ENSMUST00000121817 257 ntBASIC14.1□□□□□ -0.15
StrcQ8VIM6 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Gm37365-201ENSMUST00000193109 409 ntBASIC14.1□□□□□ -0.15
StrcQ8VIM6 Gm44814-201ENSMUST00000207018 434 ntBASIC14.1□□□□□ -0.15
StrcQ8VIM6 Gm7904-201ENSMUST00000217049 465 ntBASIC14.1□□□□□ -0.15
StrcQ8VIM6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.1□□□□□ -0.15
StrcQ8VIM6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
StrcQ8VIM6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.09□□□□□ -0.15
StrcQ8VIM6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms