Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Gm13316-201ENSMUST00000140537 691 ntBASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Map1b-203ENSMUST00000223725 2669 ntBASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm13875-201ENSMUST00000120162 282 ntBASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm13570-201ENSMUST00000140763 309 ntBASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.21□□□□□ -0.77
H1fooQ8VIK3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.21□□□□□ -0.77
H1fooQ8VIK3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H1fooQ8VIK3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
H1fooQ8VIK3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm23931-201ENSMUST00000103842 109 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm5187-201ENSMUST00000117317 991 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms