Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Gm4984-201ENSMUST00000115987 360 ntBASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.6□□□□□ -0.39
Trim60Q8VI40 Gm40466-201ENSMUST00000212174 422 ntBASIC12.6□□□□□ -0.39
Trim60Q8VI40 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.6□□□□□ -0.39
Trim60Q8VI40 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim60Q8VI40 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim60Q8VI40 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm7809-201ENSMUST00000153199 742 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm24548-201ENSMUST00000158650 108 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm3890-201ENSMUST00000182416 207 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm39404-201ENSMUST00000216350 313 ntBASIC12.59□□□□□ -0.39
Trim60Q8VI40 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim60Q8VI40 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim60Q8VI40 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.58□□□□□ -0.39
Trim60Q8VI40 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim60Q8VI40 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trim60Q8VI40 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trim60Q8VI40 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms