Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Mir6927-201ENSMUST00000184494 71 ntBASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm28450-201ENSMUST00000187349 638 ntBASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm42790-201ENSMUST00000201268 969 ntBASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm45598-202ENSMUST00000210719 986 ntBASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ndc1Q8VCB1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm7857-201ENSMUST00000117957 358 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm4909-201ENSMUST00000118749 794 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm45433-201ENSMUST00000209386 247 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndc1Q8VCB1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndc1Q8VCB1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Gm43138-201ENSMUST00000199123 708 ntBASIC11.52□□□□□ -0.57
Ndc1Q8VCB1 Gm17812-201ENSMUST00000204935 318 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms