Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Snord83b-201ENSMUST00000104546 94 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Mir1247-201ENSMUST00000116706 82 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm13392-201ENSMUST00000117708 150 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm37008-201ENSMUST00000195712 319 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf8Q8VC56 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.79□□□□□ -0.52
Rnf8Q8VC56 Gm19309-201ENSMUST00000218295 205 ntBASIC11.79□□□□□ -0.52
Rnf8Q8VC56 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.79□□□□□ -0.52
Rnf8Q8VC56 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms