Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm3436-201ENSMUST00000179930 840 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm27321-201ENSMUST00000185021 205 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm46209-201ENSMUST00000217912 553 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc9Q8VC31 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm15460-201ENSMUST00000118147 391 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm6888-201ENSMUST00000221983 706 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm8036-201ENSMUST00000118089 1718 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc9Q8VC31 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc9Q8VC31 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.65□□□□□ -0.07
Ccdc9Q8VC31 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms