Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Gm8805-201ENSMUST00000117848 313 ntBASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Gm28760-201ENSMUST00000185995 736 ntBASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ebf4Q8K4J2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf4Q8K4J2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Gm6152-201ENSMUST00000151704 340 ntBASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ebf4Q8K4J2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms