Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm43822-201ENSMUST00000200285 476 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm45331-201ENSMUST00000209868 554 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm21769-201ENSMUST00000211922 111 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Olfr582-201ENSMUST00000098212 960 ntBASIC11.5□□□□□ -0.57
Clrn1Q8K445 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm15198-201ENSMUST00000117283 177 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm14723-201ENSMUST00000118686 215 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm14726-201ENSMUST00000120623 896 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm43179-201ENSMUST00000198797 275 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm9996-201ENSMUST00000070359 913 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm10312-201ENSMUST00000078515 489 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.49□□□□□ -0.57
Clrn1Q8K445 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn1Q8K445 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn1Q8K445 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms