Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm28882-201ENSMUST00000185504 314 ntBASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cchcr1Q8K2I2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cchcr1Q8K2I2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cchcr1Q8K2I2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cchcr1Q8K2I2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Mir1982-201ENSMUST00000157368 74 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gm2546-201ENSMUST00000182630 991 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms