Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm22058-201ENSMUST00000083393 310 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm43758-201ENSMUST00000199500 367 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.3□□□□□ -0.44
Clip4Q8CI96 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clip4Q8CI96 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gm16296-201ENSMUST00000159905 325 ntBASIC12.29□□□□□ -0.44
Clip4Q8CI96 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gm38341-201ENSMUST00000195357 515 ntBASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gm7783-201ENSMUST00000204795 781 ntBASIC12.29□□□□□ -0.44
Clip4Q8CI96 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms