Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm18968-201ENSMUST00000221319 862 ntBASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Zc3h3Q8CHP0 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm23272-201ENSMUST00000104053 129 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm43912-201ENSMUST00000204352 538 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm6855-201ENSMUST00000206307 790 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm5451-201ENSMUST00000080545 579 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Zc3h3Q8CHP0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms