Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Rprl1-201ENSMUST00000158050 327 ntBASIC11.92□□□□□ -0.5
Rab43Q8CG50 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm8343-201ENSMUST00000182705 994 ntBASIC11.92□□□□□ -0.5
Rab43Q8CG50 Mir7032-201ENSMUST00000185154 79 ntBASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm37246-201ENSMUST00000192665 835 ntBASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm18711-201ENSMUST00000199341 750 ntBASIC11.92□□□□□ -0.5
Rab43Q8CG50 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab43Q8CG50 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm23912-201ENSMUST00000104687 87 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm11511-201ENSMUST00000118146 540 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm7722-201ENSMUST00000120646 741 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm8100-201ENSMUST00000182906 988 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm44126-201ENSMUST00000204831 514 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm10179-201ENSMUST00000086233 688 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.91□□□□□ -0.5
Rab43Q8CG50 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab43Q8CG50 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms