Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm9083-201ENSMUST00000120423 819 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm26461-201ENSMUST00000175064 290 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm4034-201ENSMUST00000187674 480 ntBASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcpip1Q8CDG3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Gm27501-201ENSMUST00000183599 107 ntBASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcpip1Q8CDG3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm29199-201ENSMUST00000187766 775 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms