Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Mir1894-201ENSMUST00000122802 81 ntBASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.92□□□□□ -0.66
Lysmd4Q8CC84 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Gm6745-201ENSMUST00000199216 526 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Gm45384-201ENSMUST00000210451 277 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lysmd4Q8CC84 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gm4271-201ENSMUST00000174444 973 ntBASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gm9908-201ENSMUST00000211534 448 ntBASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Gm45930-201ENSMUST00000221330 292 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms