Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Alx1Q8C8B0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm4909-201ENSMUST00000118749 794 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm11660-201ENSMUST00000120955 412 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm14277-201ENSMUST00000121195 360 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm9136-201ENSMUST00000193368 454 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm5363-201ENSMUST00000211927 938 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm26448-201ENSMUST00000082446 203 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Alx1Q8C8B0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm23200-201ENSMUST00000104379 132 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm12266-201ENSMUST00000120311 962 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm43184-201ENSMUST00000197247 542 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 AU022133-201ENSMUST00000200601 873 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm18730-201ENSMUST00000218038 343 ntBASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alx1Q8C8B0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Gm23596-201ENSMUST00000104304 132 ntBASIC14.16□□□□□ -0.14
Alx1Q8C8B0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms