Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gm30285-201ENSMUST00000214614 422 ntBASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Cts7-204ENSMUST00000225321 1257 ntBASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf3Q8C120 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm24934-201ENSMUST00000103764 111 ntBASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm27390-201ENSMUST00000184516 176 ntBASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm4034-201ENSMUST00000187674 480 ntBASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm9368-201ENSMUST00000219348 831 ntBASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf3Q8C120 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm24830-201ENSMUST00000102024 166 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm12241-201ENSMUST00000118330 726 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms