Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm29543-201ENSMUST00000188138 967 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm13981-201ENSMUST00000122360 447 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Zfp419-201ENSMUST00000173446 916 ntBASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chd9Q8BYH8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm9487-201ENSMUST00000216600 472 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm26448-201ENSMUST00000082446 203 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm24934-201ENSMUST00000103764 111 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm43184-201ENSMUST00000197247 542 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Chd9Q8BYH8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd9Q8BYH8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms