Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trerf1Q8BXJ2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm6023-201ENSMUST00000118217 606 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm27501-201ENSMUST00000183599 107 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm43179-201ENSMUST00000198797 275 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm5781-201ENSMUST00000219792 443 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trerf1Q8BXJ2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Gm24548-201ENSMUST00000158650 108 ntBASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Mir6420-201ENSMUST00000185032 102 ntBASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms