Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm13492-201ENSMUST00000119772 665 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpsf4Q8BQZ5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm10434-201ENSMUST00000101158 471 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm22323-201ENSMUST00000103832 109 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm11964-201ENSMUST00000120982 444 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Rmrp-201ENSMUST00000157463 271 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm37259-201ENSMUST00000193903 849 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpsf4Q8BQZ5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpsf4Q8BQZ5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms