Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm14704-201ENSMUST00000120300 874 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm27838-201ENSMUST00000184829 128 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm7730-201ENSMUST00000212486 454 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm6983-201ENSMUST00000214912 628 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco3Q8BQM7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Smco3Q8BQM7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm44397-201ENSMUST00000195950 113 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm42599-201ENSMUST00000201308 469 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco3Q8BQM7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms