Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smg1Q8BKX6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Gm14892-201ENSMUST00000117636 267 ntBASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Mir432-201ENSMUST00000157230 75 ntBASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Gm2474-201ENSMUST00000195162 559 ntBASIC10.02□□□□□ -0.8
Smg1Q8BKX6 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smg1Q8BKX6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm15196-201ENSMUST00000121406 482 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm14760-201ENSMUST00000121831 999 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm29543-201ENSMUST00000188138 967 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 BC080696-201ENSMUST00000202858 1218 ntBASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smg1Q8BKX6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm12418-201ENSMUST00000118116 942 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm9673-201ENSMUST00000119287 781 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smg1Q8BKX6 Gm7150-201ENSMUST00000122032 981 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms