Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp2bQ8BJF9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp2bQ8BJF9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Gm35960-201ENSMUST00000202712 767 ntBASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.49□□□□□ -0.41
Chmp2bQ8BJF9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2bQ8BJF9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2bQ8BJF9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2bQ8BJF9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2bQ8BJF9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms