Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm12502-201ENSMUST00000120197 444 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm9368-201ENSMUST00000219348 831 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm7046-201ENSMUST00000221351 977 ntBASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh20Q8BIZ0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Mir339-201ENSMUST00000083659 96 ntBASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh20Q8BIZ0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh20Q8BIZ0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms