Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clrn3Q8BHH8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Btrc-209ENSMUST00000224478 2194 ntBASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Gm6013-201ENSMUST00000212264 699 ntBASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn3Q8BHH8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm13315-201ENSMUST00000120376 991 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm11793-201ENSMUST00000120433 981 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm13342-201ENSMUST00000121055 207 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms