Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm13736-201ENSMUST00000119272 253 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm18827-201ENSMUST00000188341 790 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm44882-201ENSMUST00000205702 802 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Depdc1bQ8BH88 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm12314-201ENSMUST00000118104 538 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm9083-201ENSMUST00000120423 819 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm2383-201ENSMUST00000181461 807 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.25□□□□□ -0.29
Depdc1bQ8BH88 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Depdc1bQ8BH88 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms