Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm32025-201ENSMUST00000217960 307 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prpf38bQ80SY5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Gm23958-201ENSMUST00000157207 105 ntBASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Gm6458-201ENSMUST00000211573 635 ntBASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Prpf38bQ80SY5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm12058-201ENSMUST00000118614 437 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm7666-201ENSMUST00000146631 819 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm19353-201ENSMUST00000184561 445 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Prpf38bQ80SY5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms