Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm11663-201ENSMUST00000117888 290 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm13204-201ENSMUST00000120110 821 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm42430-201ENSMUST00000197209 616 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm30055-201ENSMUST00000203175 803 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm9487-201ENSMUST00000216600 472 ntBASIC10.33□□□□□ -0.76
Rif1Q6PR54 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.33□□□□□ -0.76
Rif1Q6PR54 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm29543-201ENSMUST00000188138 967 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm45575-201ENSMUST00000210283 548 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm14006-201ENSMUST00000122132 981 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm25394-201ENSMUST00000157338 133 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm43866-201ENSMUST00000203894 839 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm18256-201ENSMUST00000209087 907 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Gm39288-201ENSMUST00000210554 446 ntBASIC10.32□□□□□ -0.76
Rif1Q6PR54 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms