Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd1Q6PIP5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm23200-201ENSMUST00000104379 132 ntBASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd1Q6PIP5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Gm12566-201ENSMUST00000121479 359 ntBASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Gm37986-201ENSMUST00000193285 383 ntBASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 AU022133-201ENSMUST00000200601 873 ntBASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd1Q6PIP5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd1Q6PIP5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd1Q6PIP5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms