Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Mir1894-201ENSMUST00000122802 81 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gm45930-201ENSMUST00000221330 292 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gm22058-201ENSMUST00000083393 310 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm2606-201ENSMUST00000100754 1002 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm12286-201ENSMUST00000119246 1002 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm12201-201ENSMUST00000120657 1234 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm9115-201ENSMUST00000120192 1348 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm45677-201ENSMUST00000209975 1341 ntBASIC12□□□□□ -0.49
Scaf4Q6PFF0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scaf4Q6PFF0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm11814-201ENSMUST00000119515 929 ntBASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm11918-201ENSMUST00000121660 179 ntBASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm9136-201ENSMUST00000193368 454 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms