Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm21778-201ENSMUST00000178779 471 ntBASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm44315-201ENSMUST00000203041 219 ntBASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm27390-201ENSMUST00000184516 176 ntBASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.13□□□□□ -0.15
Nup98Q6PFD9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Gm6722-201ENSMUST00000221586 390 ntBASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup98Q6PFD9 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm11949-201ENSMUST00000117640 372 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm9645-201ENSMUST00000197131 792 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Olfr584-201ENSMUST00000098210 964 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup98Q6PFD9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms