Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf220Q6PDX6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.55□□□□□ -0.56
Rnf220Q6PDX6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Gm13689-201ENSMUST00000119360 685 ntBASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf220Q6PDX6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms