Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm13461-201ENSMUST00000120980 662 ntBASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm9211-201ENSMUST00000182882 975 ntBASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.29□□□□□ -0.12
Krt40Q6IFX3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm13408-201ENSMUST00000119822 798 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm13935-201ENSMUST00000121859 798 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm4310-201ENSMUST00000177847 889 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm6905-201ENSMUST00000205729 511 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Map1b-203ENSMUST00000223725 2669 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Krt40Q6IFX3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt40Q6IFX3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Gm14263-201ENSMUST00000117955 746 ntBASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Gm19287-201ENSMUST00000203190 358 ntBASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt40Q6IFX3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms