Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.02□□□□□ -0.49
VclQ64727 Gzmn-202ENSMUST00000225535 989 ntBASIC12.02□□□□□ -0.49
VclQ64727 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VclQ64727 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
VclQ64727 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VclQ64727 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
VclQ64727 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VclQ64727 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
VclQ64727 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VclQ64727 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.01□□□□□ -0.49
VclQ64727 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VclQ64727 Gm13296-201ENSMUST00000117854 997 ntBASIC12.01□□□□□ -0.49
VclQ64727 Gm15808-201ENSMUST00000119046 604 ntBASIC12.01□□□□□ -0.49
VclQ64727 Gm6963-201ENSMUST00000147879 379 ntBASIC12.01□□□□□ -0.49
VclQ64727 Gm32999-201ENSMUST00000192693 562 ntBASIC12.01□□□□□ -0.49
VclQ64727 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.01□□□□□ -0.49
VclQ64727 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VclQ64727 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.01□□□□□ -0.49
VclQ64727 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VclQ64727 Paupar-201ENSMUST00000194826 3482 ntBASIC12.01□□□□□ -0.49
VclQ64727 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VclQ64727 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VclQ64727 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Gm10728-201ENSMUST00000194292 1829 ntBASIC12□□□□□ -0.49
VclQ64727 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12□□□□□ -0.49
VclQ64727 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Gm23912-201ENSMUST00000104687 87 ntBASIC12□□□□□ -0.49
VclQ64727 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VclQ64727 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12□□□□□ -0.49
VclQ64727 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
VclQ64727 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12□□□□□ -0.49
VclQ64727 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
VclQ64727 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Gm44124-201ENSMUST00000204159 472 ntBASIC12□□□□□ -0.49
VclQ64727 Gm44882-201ENSMUST00000205702 802 ntBASIC12□□□□□ -0.49
VclQ64727 Gm45598-202ENSMUST00000210719 986 ntBASIC12□□□□□ -0.49
VclQ64727 AC154252.2-201ENSMUST00000223593 767 ntBASIC12□□□□□ -0.49
VclQ64727 AC163667.3-201ENSMUST00000225774 222 ntBASIC12□□□□□ -0.49
VclQ64727 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
VclQ64727 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12□□□□□ -0.49
VclQ64727 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VclQ64727 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms