Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sdc3Q64519 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sdc3Q64519 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sdc3Q64519 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
Sdc3Q64519 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.77□□□□□ -0.52
Sdc3Q64519 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sdc3Q64519 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.77□□□□□ -0.52
Sdc3Q64519 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sdc3Q64519 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sdc3Q64519 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Sdc3Q64519 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.77□□□□□ -0.52
Sdc3Q64519 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sdc3Q64519 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm12997-201ENSMUST00000120207 640 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm13097-201ENSMUST00000210722 397 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sdc3Q64519 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sdc3Q64519 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.77□□□□□ -0.53
Sdc3Q64519 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm24231-201ENSMUST00000104315 133 ntBASIC11.76□□□□□ -0.53
Sdc3Q64519 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm12314-201ENSMUST00000118104 538 ntBASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Sdc3Q64519 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Sdc3Q64519 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sdc3Q64519 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sdc3Q64519 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.76□□□□□ -0.53
Sdc3Q64519 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sdc3Q64519 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.76□□□□□ -0.53
Sdc3Q64519 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sdc3Q64519 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc3Q64519 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.75□□□□□ -0.53
Sdc3Q64519 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms