Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.24□□□□□ -0.61
AtmQ62388 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
AtmQ62388 Gm16459-201ENSMUST00000121443 686 ntBASIC11.24□□□□□ -0.61
AtmQ62388 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.24□□□□□ -0.61
AtmQ62388 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.24□□□□□ -0.61
AtmQ62388 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.24□□□□□ -0.61
AtmQ62388 Gm6450-201ENSMUST00000200896 574 ntBASIC11.24□□□□□ -0.61
AtmQ62388 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.24□□□□□ -0.61
AtmQ62388 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.24□□□□□ -0.61
AtmQ62388 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
AtmQ62388 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AtmQ62388 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
AtmQ62388 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.23□□□□□ -0.61
AtmQ62388 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.23□□□□□ -0.61
AtmQ62388 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
AtmQ62388 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
AtmQ62388 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gm24279-201ENSMUST00000104236 131 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.23□□□□□ -0.61
AtmQ62388 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.23□□□□□ -0.61
AtmQ62388 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
AtmQ62388 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.23□□□□□ -0.61
AtmQ62388 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
AtmQ62388 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
AtmQ62388 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.23□□□□□ -0.61
AtmQ62388 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
AtmQ62388 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AtmQ62388 Gm11996-201ENSMUST00000117538 915 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Gm15207-201ENSMUST00000119259 442 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
AtmQ62388 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
AtmQ62388 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
AtmQ62388 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm27675-201ENSMUST00000184527 94 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm44315-201ENSMUST00000203041 219 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
AtmQ62388 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.22□□□□□ -0.61
AtmQ62388 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
AtmQ62388 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gm15707-201ENSMUST00000118804 996 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Gm15615-201ENSMUST00000118876 198 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.22□□□□□ -0.61
AtmQ62388 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms