Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Gm11619-201ENSMUST00000117474 237 ntBASIC14.08□□□□□ -0.16
Scn9aQ62205 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.08□□□□□ -0.16
Scn9aQ62205 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn9aQ62205 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.08□□□□□ -0.16
Scn9aQ62205 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.08□□□□□ -0.16
Scn9aQ62205 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.08□□□□□ -0.16
Scn9aQ62205 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn9aQ62205 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn9aQ62205 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scn9aQ62205 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.07□□□□□ -0.16
Scn9aQ62205 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn9aQ62205 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.07□□□□□ -0.16
Scn9aQ62205 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm37852-201ENSMUST00000193027 350 ntBASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm37826-201ENSMUST00000195329 322 ntBASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm7082-201ENSMUST00000209880 969 ntBASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn9aQ62205 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn9aQ62205 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm22379-201ENSMUST00000157480 131 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm17214-201ENSMUST00000164501 541 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm28937-201ENSMUST00000185413 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm29400-201ENSMUST00000187208 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm28662-201ENSMUST00000188446 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm28251-201ENSMUST00000188835 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm37318-201ENSMUST00000194325 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm38017-201ENSMUST00000194768 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm37287-201ENSMUST00000195449 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm37793-201ENSMUST00000195548 695 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.06□□□□□ -0.16
Scn9aQ62205 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn9aQ62205 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn9aQ62205 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms