Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Foxc1Q61572 Gm44746-201ENSMUST00000205565 1349 ntBASIC9.29□□□□□ -0.92
Foxc1Q61572 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Foxc1Q61572 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm5392-201ENSMUST00000122189 789 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm19184-201ENSMUST00000196798 928 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm17910-201ENSMUST00000211038 838 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Foxc1Q61572 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm43149-201ENSMUST00000198162 1422 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm43341-201ENSMUST00000200104 1308 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Foxc1Q61572 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Foxc1Q61572 Gm42975-201ENSMUST00000200612 1491 ntBASIC9.28□□□□□ -0.92
Foxc1Q61572 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Foxc1Q61572 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Foxc1Q61572 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.27□□□□□ -0.92
Foxc1Q61572 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms