Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccne1Q61457 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccne1Q61457 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccne1Q61457 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccne1Q61457 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm8815-201ENSMUST00000173809 620 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm9630-201ENSMUST00000178304 885 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm10731-201ENSMUST00000181171 448 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm5706-201ENSMUST00000181525 993 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm2517-201ENSMUST00000215651 348 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm6867-201ENSMUST00000219165 425 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccne1Q61457 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.8■□□□□ 0.12
Ccne1Q61457 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Ccne1Q61457 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccne1Q61457 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm13916-201ENSMUST00000117368 628 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm11949-201ENSMUST00000117640 372 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm15352-201ENSMUST00000118696 270 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm11246-201ENSMUST00000120880 345 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccne1Q61457 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm5714-201ENSMUST00000197343 566 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm7600-201ENSMUST00000209657 785 ntBASIC15.79■□□□□ 0.12
Ccne1Q61457 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccne1Q61457 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccne1Q61457 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccne1Q61457 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccne1Q61457 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.78■□□□□ 0.12
Ccne1Q61457 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.78■□□□□ 0.12
Ccne1Q61457 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Gm8194-201ENSMUST00000159783 859 ntBASIC15.78■□□□□ 0.12
Ccne1Q61457 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccne1Q61457 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccne1Q61457 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccne1Q61457 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccne1Q61457 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ccne1Q61457 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.77■□□□□ 0.12
Ccne1Q61457 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccne1Q61457 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccne1Q61457 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccne1Q61457 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccne1Q61457 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms