Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm45120-201ENSMUST00000208880 408 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm44329-201ENSMUST00000197469 112 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm44158-201ENSMUST00000203881 505 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.91□□□□□ -0.5
Cacna1eQ61290 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cacna1eQ61290 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm16071-201ENSMUST00000119589 793 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm17826-201ENSMUST00000189720 798 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm9132-201ENSMUST00000210182 832 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.9□□□□□ -0.5
Cacna1eQ61290 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cacna1eQ61290 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cacna1eQ61290 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cacna1eQ61290 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm6450-201ENSMUST00000200896 574 ntBASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm3619-201ENSMUST00000219947 775 ntBASIC11.89□□□□□ -0.51
Cacna1eQ61290 Gm19009-201ENSMUST00000223072 823 ntBASIC11.89□□□□□ -0.51
Cacna1eQ61290 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.89□□□□□ -0.51
Cacna1eQ61290 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms