Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ClpbQ60649 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.73□□□□□ -0.53
ClpbQ60649 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ClpbQ60649 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
ClpbQ60649 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
ClpbQ60649 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.72□□□□□ -0.53
ClpbQ60649 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm15547-201ENSMUST00000122152 333 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm25043-201ENSMUST00000158604 212 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.72□□□□□ -0.53
ClpbQ60649 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.72□□□□□ -0.53
ClpbQ60649 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm6082-201ENSMUST00000215204 454 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
ClpbQ60649 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ClpbQ60649 Map1b-203ENSMUST00000223725 2669 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
ClpbQ60649 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.72□□□□□ -0.53
ClpbQ60649 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.72□□□□□ -0.53
ClpbQ60649 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
ClpbQ60649 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
ClpbQ60649 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Gm25214-201ENSMUST00000104573 129 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Mir877-201ENSMUST00000104738 85 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ClpbQ60649 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.71□□□□□ -0.53
ClpbQ60649 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.71□□□□□ -0.53
ClpbQ60649 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.71□□□□□ -0.53
ClpbQ60649 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.71□□□□□ -0.53
ClpbQ60649 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.71□□□□□ -0.53
ClpbQ60649 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ClpbQ60649 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.71□□□□□ -0.53
ClpbQ60649 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ClpbQ60649 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
ClpbQ60649 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms