Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.74□□□□□ -0.37
Satb1Q60611 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.74□□□□□ -0.37
Satb1Q60611 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.74□□□□□ -0.37
Satb1Q60611 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm13492-201ENSMUST00000119772 665 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm6963-201ENSMUST00000147879 379 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Rmrp-201ENSMUST00000157463 271 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm37201-201ENSMUST00000191845 523 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Gm34023-201ENSMUST00000195539 217 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.73□□□□□ -0.37
Satb1Q60611 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.73□□□□□ -0.37
Satb1Q60611 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Satb1Q60611 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Satb1Q60611 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.73□□□□□ -0.37
Satb1Q60611 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Satb1Q60611 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Satb1Q60611 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Satb1Q60611 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Satb1Q60611 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.72□□□□□ -0.37
Satb1Q60611 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Satb1Q60611 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.72□□□□□ -0.37
Satb1Q60611 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm14058-201ENSMUST00000116082 735 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Gm12380-201ENSMUST00000119012 544 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.72□□□□□ -0.37
Satb1Q60611 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm22121-201ENSMUST00000175148 54 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Gm27627-201ENSMUST00000183644 150 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.72□□□□□ -0.37
Satb1Q60611 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.72□□□□□ -0.37
Satb1Q60611 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Satb1Q60611 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms